From 832561cabc919245c303b092a3634e365b0a2645 Mon Sep 17 00:00:00 2001 From: ACID Design Lab <82499756+acid-design-lab@users.noreply.github.com> Date: Sat, 8 Jun 2024 01:13:22 +0300 Subject: [PATCH] Update README.md --- README.md | 16 +++++++++++++--- 1 file changed, 13 insertions(+), 3 deletions(-) diff --git a/README.md b/README.md index a563b87..67680db 100644 --- a/README.md +++ b/README.md @@ -2,7 +2,7 @@ drawing -**About the project** :information_source: +## About the project :information_source: --- @@ -36,10 +36,14 @@ **7. Project design.** All results should be structured and systematized on GitHub for transparency and reproducibility. +--- + ### Challenges :trophy: The main challenge here is to develop **unbiased model** not limited to existing CPP structures and cell penetration mechanisms. Another challenge is to develop CPPs **for particular drug delivery system and setup**, which includes multi-property optimization (amphiphilicity, molecular weight, toxicity etc.). Finally, models should be **interpretable**, which means user should know why particular CPP demonstrates its activity, and what are the possible ways to improve it further. +--- + ### What do you need to do? :computer: **1. Choose the tasks.** Sequence classification, uptake quantitative prediction, or sequence generation. @@ -109,17 +113,23 @@ - structure, debug, and prettify the code - ensure all dependencies needed for correct code work are listed in requirements.txt -### Schedule :calendar: +--- + +## Schedule :calendar: DataCon 3.0 includes not only practices but authoritative lectures and other activities, therefore check for any schedule updates [HERE](https://scamt.ifmo.ru/datacon/). -### Contents :open_book: +--- + +## Contents :open_book: This repository contains the following data: 1. **Articles about CPPs** to read (see the relevant folder) 2. **Available datasets** for model development (see **Data Description** section) 3. **Useful tools** for property and structure prediction (see **Useful tools** section and relevant folder) +--- + ## Data description :floppy_disk: ### 1. Mixed CPPs