diff --git a/README.md b/README.md index 667466b..f1ca4e5 100644 --- a/README.md +++ b/README.md @@ -18,19 +18,19 @@ Here are the main steps which will allow you to build a precise model for CPP design: - **1. Data curation and cleaning.** All inappropriate or ambiguous data should be removed or corrected. - - **2. Data unification.** The data presented in Datasets are heterogeneous and should be unified in terms of variables, measurement units etc. - - **3. System parametriation.** You need to choose the set of parameters to describe CPPs as well as experimental setup. Most of the models use symbolic representations lacking physico-chemical properties crucial for CPP activity prediction. - - **4. Model selection.** Best-performing models should be choosen for screening depending on the task complexity (sequence classification or sequence generation). - - **5. Feature selecction.** After model selection, features used in the model should be choosen showing optimal prediction performance, robustness, and interpretability. - - **6. Evaluation.** Every model should be evaluated beyond performance on train/test datasets. It can be structural analysis of CPP candidates, modelling of interaction with cellular membranes etc. - - **7. Project design.** All results should be structured and systematized on GitHub for transparency and reproducibility. + **1. Data curation and cleaning.** All inappropriate or ambiguous data should be removed or corrected. + + **2. Data unification.** The data presented in Datasets are heterogeneous and should be unified in terms of variables, measurement units etc. + + **3. System parametriation.** You need to choose the set of parameters to describe CPPs as well as experimental setup. Most of the models use symbolic representations lacking physico-chemical properties crucial for CPP activity prediction. + + **4. Model selection.** Best-performing models should be choosen for screening depending on the task complexity (sequence classification or sequence generation). + + **5. Feature selecction.** After model selection, features used in the model should be choosen showing optimal prediction performance, robustness, and interpretability. + + **6. Evaluation.** Every model should be evaluated beyond performance on train/test datasets. It can be structural analysis of CPP candidates, modelling of interaction with cellular membranes etc. + + **7. Project design.** All results should be structured and systematized on GitHub for transparency and reproducibility. ### Challenges