Datasets upload

Datasets/Natural CPPs/Experimental.txt

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+AAVALLPAVLLALLAKNNLKDCGLF
+AAVALLPAVLLALLAKNNLKECGLY
+AAVALLPAVLLALLAPVQRKQKLMP
+AAVALLPAVLLALLAVTDQLGEDFFAVDLEAFLQEFGLLPEKE
+AAVLLPVLLAAP
+AGYLLGKINLKALAALAKKIL
+AGYLLGKLKALAALAKKIL
+AHALCLTERQIKIWFQNRRMKWKKEN
+AHALCPPERQIKIWFQNRRMKWKKEN
+ALWKTLLKKVLKA
+AYALCLTERQIKIWFANRRMKWKKEN
+CGPGSDDEAAADAQHAAPPKKKRKVGY
+CNGRC
+CNGRCG
+CNGRCGGKKLKLLKLL
+CNGRCGGKLAKLAKLAKLAK
+CNGRCGGLVTT
+GAARVTSWLGRQLRIAGKRLEGRSK
+GALFLGFLGAAGSTMGAWSQPKSKRKV
+GGRQIKIWFQNRRMKWKK
+GIGKFLHSAKKWGKAFVGQIMNC
+GLAFLGFLGAAGSTMGAWSQPKSKRKV
+GRKKRRQ
+GRKKRRQRRPPQC
+GRKKRRQRRRC
+GRKKRRQRRRPPC
+GRKKRRQRRRPQ
+GRQLRIAGKRLEGRSK
+GWTLNPAGYLLGKINLKALAALAKKIL
+GWTLNPPGYLLGKINLKALAALAKKIL
+GWTLNSAGYLLGKINLKALAALAKKIL
+GWTLNSAGYLLGKINLKALAALAKKLL
+GWTLNSAGYLLGKLKALAALAKKIL
+GWTLNSKINLKALAALAKKIL
+INLKALAALAKKIL
+IWFQNRRMKWKK
+KALAALLKKWAKLLAALK
+KALAKALAKLWKALAKAA
+KALKKLLAKWAAAKALL
+KCRKKKRRQRRRKKLSECLKRIGDELDS
+KCRKKKRRQRRRKKPVVHLTLRQAGDDFSR
+KETWWETWWTEWSQPKKKRKV
+KETWWETWWTEWSQPKKRKV
+KFHTFPQTAIGVGAP
+KITLKLAIKAWKLALKAA
+KIWFQNRRMKWKK
+KLAAALLKKWKKLAAALL
+KLALKALKALKAALKLA
+KLALKLALKALKAALK
+KLALKLALKALQAALQLA
+KLALKLALKAWKAALKLA
+KLALQLALQALQAALQLA
+KMTRAQRRAAARRNRWTAR
+KRPAATKKAGQAKKKKL
+LGTYTQDFNKFHTFPQTAIGVGAP
+LIRLWSHLIHIWFQNRRLKWKKK
+LKTLATALTKLAKTLTTL
+LKTLTETLKELTKTLTEL
+LLGDFFRKSKEKIGKEFKRIVQRIKDFLRNLVPRTESC
+LLIILRARIRKQAHAHSK
+LLIILRRPIRKQAHAHSK
+LLIILRRRIRKQAHAHSA
+LLIILRRRIRKQAHAHSK
+LNSAGYLLGKINLKALAALAKKIL
+LNSAGYLLGKLKALAALAKIL
+MANLGYWLLALFVTMWTDVGLCKKRPKP
+MDAQTRRRERRAEKQAQWKAAN
+MGLGLHLLVLAAALQGAKKKRKV
+MPKKKPTPIQLNP
+MVKSKIGSWILVLFVAMWSDVGLCKKRPKP
+MVTVLFRRLRIRRACGPPRVRV
+NAKTRRHERRRKLAIER
+PKKKRKV
+PKKKRKVALWKTLLKKVLKA
+PMLKE
+QLALQLALQALQAALQLA
+RGGRLSSYSRRRFSTSTGR
+RGGRLSYSRRRFSTSTGR
+RGGRLSYSRRRFSTSTGRA
+RKKRRQRRR
+RKSSKPIMEKRRRAR
+RQARRNRRRALWKTLLKKVLKA
+RQGAARVTSWLGRQLRIAGKRLEGR
+RQGAARVTSWLGRQLRIAGKRLEGRSK
+RQIKIWFPNRRMKWKK
+RQIKIWFQNMRRKWKK
+RQIKIWFQNRRMKWKK
+RQIKIWFQNRRMKWKKLRKKKKKH
+RQIRIWFQNRRMRWRR
+RQPKIWFPNRRMPWKK
+RRLSSYSSRRRF
+RRMKWKK
+RRRRRRRRR
+RRWRRWWRRWWRRWRR
+RVIRVWFQNKRCKDKK
+RVTSWLGRQLRIAGKRLEGRSK
+SWLGRQLRIAGKRLEGRSK
+TAKTRYKARRAELIAERR
+TRQARRNRRRWRERQR
+TRRNKRNRIQEQLNRK
+TRSSRAGLQFPVGRVHRLLRK
+TRSSRAGLQWPVGRVHRLLRKGGC
+VPALR
+VPMLK
+VPTLK
+VQAILRRNWNQYKIQ
+VRLPPPVRLPPPVRLPPP
+WFQNRRMKWKK
+YGRKKRRQRRR
+YGRKKRRQRRRGTSSSSDELSWIIELLEK
+YGRKKRRQRRRSVYDFFVWL

Datasets/Natural CPPs/Experimental2.txt

@@ -0,0 +1,708 @@
+AAAAARRRIRKQAHAHSK
+AAVACRICMRNFSTRQARRNHRRRHRR
+AAVALLPAVLLALLAK
+AAVALLPAVLLALLAKKNNLKDCGLF
+AAVALLPAVLLALLAKKNNLKECGLY
+AAVALLPAVLLALLAP
+AAVALLPAVLLALLAPEILLPNNYNAYESYKYPGMFIALSK
+AAVALLPAVLLALLAPRKKRRQRRRPPQ
+AAVALLPAVLLALLAPRKKRRQRRRPPQC
+AAVALLPAVLLALLAPRRRRRR
+AAVALLPAVLLALLAPSGASGLDKRDYV
+AAVALLPAVLLALLAPVQRKRQKLMP
+AAVALLPAVLLALLAVTDQLGEDFFAVDLEAFLQEFGLLPEKE
+ADVFDRGGPYLQRGVADLVPTATLLDTYSP
+AEKVDPVKLNLTLSAAAEALTGLGDK
+AGYLLGKINLKALAALAKKIL
+AGYLLGKINLKALAALAKKILTYADFIASGRTGRRNAI
+AGYLLGKLKALAALAKKIL
+AHALCLTERQIKIWFQNRRMKWKKEN
+AHALCPPERQIKIWFQNRRMKWKKEN
+AIIYRDLIS
+AIPNNQLGFPFK
+AKKRRQRRR
+AKVKDEPQRRSARLSAKPAPPKPEPKPKKAPAKK
+ALIILRRRIRKQAHAHSK
+ALWKTLLKKVLKA
+ALWKTLLKKVLKAPKKKRKV
+ALWMRWYSPTTRRYG
+ALWMTLLKKVLKAAAKAALNAVLVGANA
+APWHLSSQYSRT
+AQIKIWFQNRRMKWKK
+ARTINAQQAELDSALLAAAGFGNTTADVFDRG
+ASMWERVKSIIKSSLAAASNI
+AVPAENALNNPF
+AYALCLTERQIKIWFANRRMKWKKEN
+AYRIKPTFRRLKWKYKGKFW
+CGAYDLRRRERQSRLRRRERQSR
+CGNKRTRGC
+CIISRDLISH
+CRFRFKCCKK
+CRFRWKCCKK
+CRQIKIWFPNRRMKWKKC
+CRQIKIWFQNRRMKWKK
+CRWRFKCCKK
+CRWRWKCCKK
+CRWRWKCG
+CRWRWKCGCKK
+CRWRWKCSKK
+CRWRWKSSKK
+CSIPPEVKFNPFVYLI
+CVKRGLKLRHVRPRVTRDV
+CVQWSLLRGYQPC
+CWKKK
+CWKKKKKKKK
+CWKKKKKKKKKKKKK
+CWKKKKKKKKKKKKKKKKKK
+DAATATRGRSAASRPTQRPRAPARSASRPRRPVE
+DCRWRWKCCKK
+DFNKFHTFPQTAIGVGAP
+DPATNPGPHFPR
+DPKGDPKGVTVTVTVTVTGKGDPKPD
+DPVDTPNPTRRKPGK
+DRDDRDDRDDRDDRDDR
+DRDRDRDRDR
+DRRRRGSRPSGAERRRR
+DRRRRGSRPSGAERRRRRAAAA
+DSLKSYWYLQKFSWR
+DTWAGVEAIIRILQQLLFIHFR
+EEE
+EEEAA
+EEEAAGRKRKKRT
+EEEAAKKK
+EKGKKIFIMK
+EKRPRTAFSSEQLARLKREFNENRYLTTERRRQQLSSELGLNEAQIKIWFQNKRAKIKKST
+ELALELALEALEAALELA
+ELPVM
+EPDNWSLDFPRR
+ERERERERERERER
+ERKKRRRE
+FAPWDTASFMLG
+FDPFFWKYSPRD
+FFFAAGRKRKKRT
+FIIFRIAASHKK
+FIRIGC
+FITKALGISYGRKKRR
+FITKALGISYGRKKRRQRRRPPQ
+FKKFRKF
+FLGKKFKKYFLQLLK
+FLIFIRVICIVIAKLKANLMCKT
+FQNRRMKWKK
+FQPYDHPAEVSY
+FQWQRNMRKVRGPPVS
+FRVPLRIRPCVVAPRLVMVRHTFGRIARWVAGPLETR
+FTYKNFFWLPEL
+FVTRGCPRRLVARLIRVMVPRR
+GALFLAFLAAALSLMGLWSQPKKKRRV
+GALFLGFLGAAGSTMGAWSQPKKKRKV
+GALFLGFLGAAGSTMGAWSQPKSKRKV
+GAYDLRRRERQSRLRRRERQSR
+GDVYADAAPDLFDFLDSSVTTARTINA
+GEQIAQLIAGYIDIILKKKKSK
+GGGARKKAAKAARKKAAKAARKKAAKAARKKAAKA
+GGVCPAILKKCRRDSDCPGACICRGNGYCGSGSD
+GGVCPKILAACRRDSDCPGACICRGNGYCGSGSD
+GGVCPKILAKCRRDSDCPGACICRGNGYCGSGSD
+GGVCPKILKACRRDSDCPGACICRGNGYCGSGSD
+GGVCPKILKKCRRDSDCPGACICRGNGYCGSGSD
+GIGKFLHSAKKWGKAFVGQIMNC
+GKHRHERGHHRDRRER
+GKINLKALAALAKKIL
+GKKKKKKKKK
+GKKKKRKREKL
+GKKKRKLSNRESAKRSR
+GKKTNLFSALIKKKKTA
+GKRARNTEAARRSRARKL
+GKRKKKGKLGKKRDP
+GKRKKKGKLGKKRPRSR
+GKRRRRATAKYRSAH
+GKRVAKRKLIEQNRERRR
+GKYVSLTTPKNPTKRRITPKDV
+GLFEALLELLESLWELLLEA
+GLFKALLKLLKSLWKLLLKA
+GLFRALLRLLRSLWRLLLRA
+GLGDKFGESIVNANTVLDDLNSRMPQSRHDIQQL
+GLGSLLKKAGKKLKQPKSKRKV
+GLLEALAELLEGLRKRLRKFRNKIKEK
+GLPVCGETCVGGTCNTPGCKCSWPVCTRN
+GLPVCGETCVGGTCNTPGCTCSWPKCTRN
+GLRKRLRKFRNKIKEK
+GLWRALWRALRSLWKLKRKV
+GLWRALWRALWRSLWKKKRKV
+GLWRALWRALWRSLWKLKRKV
+GLWRALWRALWRSLWKLKWKV
+GLWRALWRALWRSLWKSKRKV
+GLWRALWRGLRSLWKKKRKV
+GLWRALWRGLRSLWKLKRKV
+GLWRALWRLLRSLWRLLWKA
+GLWRALWRLLRSLWRLLWRA
+GLWRALWRLLRSLWRLLWSQPKKKRKV
+GLWWRLWWRLRSWFRLWFRA
+GPFHFYQFLFPPV
+GRCTKSIPPICFPD
+GRKGKHKRKKLP
+GRKKRRQARAPPQC
+GRKKRRQPPQC
+GRKKRRQRARPPQC
+GRKKRRQRPPQC
+GRKKRRQRRPPQC
+GRKKRRQRRR
+GRKKRRQRRRC
+GRKKRRQRRRPP
+GRKKRRQRRRPPQ
+GRKKRRQRRRPPQC
+GRKKRRQRRRPPQGRKKRRQRRRPPQGRKKRRQRRRPPQ
+GRKKRRQRRRPPQTYADFIASGRTGRRNAI
+GRKKRRQRRRPWQ
+GRKLKKKKNEKEDKRPRT
+GRKRKKRT
+GRPRESGKKRKRKRLKP
+GRQLRIAGKRLEGRSK
+GRQLRIAGKRLRGRSK
+GRQLRIAGRRLRGRSR
+GRQLRIAGRRLRRRSR
+GRQLRRAGRRLRGRSR
+GRQLRRAGRRLRRRSR
+GRRERNKMAAAKCRNRRR
+GRRHHCRSKAKRSRHH
+GRRRRATAKYRTAH
+GRRRRKRLSHRT
+GRRRRRERNK
+GRRRRRRRRRPPQ
+GSGKKGGKKHCQKY
+GSGKKGGKKICQKY
+GSPWGLQHHPPRT
+GSRHPSLIIPRQ
+GTKMIFVGIKKKEERADLIAYLKKA
+GWTLNPAGYLLGKINLKALAALAKKIL
+GWTLNPPGYLLGKINLKALAALAKKIL
+GWTLNSAGYLLGKFLPLILRKIVTAL
+GWTLNSAGYLLGKINLKALAALAKKIL
+GWTLNSAGYLLGKINLKALAALAKKLL
+GWTLNSAGYLLGKINLKAPAALAKKIL
+GWTLNSAGYLLGKLKALAALAKKIL
+GWTLNSAGYLLGPHAVGNHRSFSDKNGLTS
+GWTLNSKINLKALAALAKKIL
+GYGNCRHFKQKPRRD
+GYGRKKRRGRRRTHRLPRRRRRR
+GYGRKKRRQRRRG
+HARIKPTFRRLKWKYKGKFW
+HFAAWGGWSLVH
+HHHHHHTKRRITPKDVIDVRSVTTEINT
+HIQLSPFSQSWR
+HPGSPFPPEHRP
+HQHKPPPLTNNW
+HRHIRRQSLIML
+HYRIKPTARRLKWKYKGKFW
+HYRIKPTFRRLAWKYKGKFW
+HYRIKPTFRRLKWKYKGKFA
+IAWVKAFIRKLRKGPLG
+IGCRH
+IIYRDLISH
+IKIWFQNRRMKWKK
+ILRRRIRKQAHAHSK
+INLKALAALAKKIL
+IPALK
+IPMIK
+IPMLK
+IPSRWKDQFWKRWHY
+IWFQNRRMKWKK
+IYRDLISH
+KALAALLKKLAKLLAALK
+KALAALLKKWAKLLAALK
+KALAKALAKLWKALAKAA
+KALKKLLAKWLAAAKALL
+KALKLKLALALLAKLKLA
+KCCKWRWRCK
+KCFMWQEMLNKAGVPKLRCARK
+KCFQWQRNMRKVR
+KCFQWQRNMRKVRGPPVSC
+KCFQWQRNMRKVRGPPVSCIKR
+KCFQWQRNMRKVRGPPVSSIKR
+KCGCRWRWKCGCKK
+KCPSRRPKR
+KCRWRWKCCKK
+KDCRWRWKCCKK
+KETWFETWFTEWSQPKKKRKV
+KETWWETWWTEWSQPGRKKRRQRRRPPQ
+KETWWETWWTEWSQPKKKRKV
+KFHTFPQTAIGVGAP
+KGKKIFIMK
+KGRTPIKFGKADCDRPPKHSQNGMGK
+KGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQ
+KIAAKSIAKIWKSILKIA
+KITLKLAIKAWKLALKAA
+KIWFQNRRMKWKK
+KKAAQIRSQVMTHLRVI
+KKDGKKRKRSRKESYSVYVYKVLKQ
+KKICTRKPRFMSAWAQ
+KKKEERADLIAYLKKA
+KKKKKKGGFLGFWRGENGRKTRSAYERMCILKGK
+KKKKKKKKKKKKKKKKKKK
+KKPGKKTTTKPTKK
+KKPGKKTTTKPTKKPTIKTTKK
+KKPTIKTTKK
+KKRRQRRR
+KKTTTKPTKK
+KKWKMRRNQFWIKIQR
+KLAAALLKKWKKLAAALL
+KLALKAAAKAWKAAAKAA
+KLALKAALKAWKAAAKLA
+KLALKALKAALKLA
+KLALKLALKALKAA
+KLALKLALKALKAALK
+KLALKLALKALKAALKLA
+KLALKLALKALKAALKLAGC
+KLALKLALKALQAALQLA
+KLALKLALKAWKAALKLA
+KLALKLALKWAKLALKAA
+KLALQLALQALQAALQLA
+KLGLKLGLKGLKGGLKLG
+KLGVM
+KLIKGRTPIKFGK
+KLIKGRTPIKFGKADCDRPPKHSGK
+KLIKGRTPIKFGKADCDRPPKHSQNGK
+KLIKGRTPIKFGKADCDRPPKHSQNGM
+KLIKGRTPIKFGKADCDRPPKHSQNGMGK
+KLIKGRTPIKFGKARCRRPPKHSGK
+KLLAKAAKKWLLLALKAA
+KLLAKAALKWLLKALKAA
+KLPCRSNTFLNIFRRKKPG
+KLPVM
+KLPVT
+KLTRAQRRAAARKNKRNTRGC
+KLWMRWYSATTRRYG
+KLWMRWYSPTTRRYG
+KLWMRWYSPWTRRYG
+KLWSAWPSLWSSLWKP
+KMDCRPRPKCCKK
+KMDCRWRPKCCKK
+KMDCRWRWKCCKK
+KMDCRWRWKCKK
+KMDCRWRWKCSKK
+KMDCRWRWKKK
+KMDCRWRWKSCKK
+KMDCRWRWKSSKK
+KMDRWRWKKK
+KMDSRWRWKCCKK
+KMDSRWRWKCSKK
+KMDSRWRWKSCKK
+KMDSRWRWKSSKK
+KMIFVGIKKK
+KMIFVGIKKKEERA
+KMTRAQRRAAARRNRWTARGC
+KNAWKHSSCHHRHQI
+KPRSKNPPKKPK
+KRARNTEAARRSRARKLQRMKQGC
+KRIHPRLTRSIR
+KRIIQRILSRNS
+KRIPNKKPGKK
+KRIPNKKPGKKT
+KRIPNKKPGKKTTTKPTKK
+KRIPNKKPGKKTTTKPTKKPTIK
+KRIPNKKPGKKTTTKPTKKPTIKTTKK
+KRIPNKKPGKKTTTKPTKKPTIKTTKKDLK
+KRIPNKKPGKKTTTKPTKKPTIKTTKKDLKPQTTKPK
+KRIPNKKPKK
+KRPAAIKKAGQAKKKK
+KRRIRRERNKMAAAKSRNRRRELTDTGC
+KRRQRRR
+KRVSRNKSEKKRR
+KRWRWKCCKK
+KSHAHAQKRIRRRLIILL
+KSICKTIPSNKPKKK
+KTIEAHPPYYAS
+KTIPSNKPKKK
+KTVLLRKLLKLLVRKI
+KWFETWFTEWPKKRK
+LAIILRRRIRKQAHAHSK
+LDITPFLSLTLP
+LDTYSPELFCTIRNFYDADRPDRGAAA
+LGISYGRKKRRQRRRPPQ
+LGLLLRHLRHHSNLLANI
+LGTYTQDFNKFHTFPQTAIGVGAP
+LIIFAIAASHKK
+LIIFAILISHKK
+LIIFRIAASHKK
+LIIFRILISH
+LIIFRILISHHH
+LIIFRILISHK
+LIIFRILISHKK
+LIIFRILISHR
+LIIFRILISHRR
+LIRLWSHLIHIWFQNRRLKWKKK
+LKTLATALTKLAKTLTTL
+LKTLTETLKELTKTLTEL
+LLAILRRRIRKQAHAHSK
+LLETLLKPFQCRICMRNFSTRQARRNHRRRHRR
+LLGDFFRKSKEKIGKEFKRIVQRIKDFLRNLVPRTESC
+LLGKINLKALAALAKKIL
+LLIALRRRIRKQAHAHSK
+LLIIARRRIRKQAHAHSK
+LLIILARRIRKQAHAHSK
+LLIILRARIRKQAHAHSK
+LLIILRRAIRKQAHAHSK
+LLIILRRRARKQAHAHSK
+LLIILRRRIARKQAHAHSK
+LLIILRRRIRAQAHAHSK
+LLIILRRRIRKAAHAHSK
+LLIILRRRIRKQAAAHSK
+LLIILRRRIRKQAHAASK
+LLIILRRRIRKQAHAHAK
+LLIILRRRIRKQAHAHSA
+LLIILRRRIRKQAHAHSK
+LLKKRKVVRLIKFLLK
+LLKTTALLKTTALLKTTA
+LLKTTELLKTTELLKTTE
+LNSAGYLLGKALAALAKKIL
+LNSAGYLLGKINLKALAALAKKIL
+LNSAGYLLGKLKALAALAK
+LNSAGYLLGKLKALAALAKIL
+LNVPPSWFLSQR
+LPHPVLHMGPLR
+LRRERQSRLRRERQSR
+LTMPSDLQPVLW
+LTRNYEAWVPTP
+MAIYRDLIS
+MANLGCWMLVLFVATWSDLGLCKKRPKP
+MANLGYWLLALFVTMWTDVGLCKKRPKP
+MDAQTRRRERRAEKQAQWKAANGC
+MDCRWRWKCCKK
+MGLGLHLLVLAAALQGAKKKRKV
+MGLGLHLLVLAAALQGAWSQPKKKRKV
+MHKRPTTPSRKM
+MIAYRDLIS
+MIIARDLIS
+MIIFAIAASHKK
+MIIFKIAASHKK
+MIIFRAAASHKK
+MIIFRALISHKK
+MIIFRDLISH
+MIIFRIAASHKK
+MIIFRIAATHKK
+MIIFRIAAYHKK
+MIIFRILISHKK
+MIIRRDLISE
+MIISRDLISH
+MIIYADLIS
+MIIYARRAEE
+MIIYRAEISH
+MIIYRALIS
+MIIYRALISHKK
+MIIYRD
+MIIYRDAIS
+MIIYRDKKSH
+MIIYRDL
+MIIYRDLAS
+MIIYRDLI
+MIIYRDLIA
+MIIYRDLIS
+MIIYRDLISH
+MIIYRDLISKK
+MIIYRIAASHKK
+MLLLTRRRST
+MTPSSLSTLPWP
+MVKSKIGSWILVLFVAMWSDVGLCKKRPKP
+MVRRFLVTLRIRRACGPPRVRV
+MVRRFLVTLRIRRACGPPRVRVFVVHIPRLTGEWAAP
+MVTVLFRRLRIRRACGPPRVRV
+NAKTRRHERRRKLAIERGC
+NIENSTLATPLS
+NKPILVFY
+NKRILIRIMTRP
+NNNAAGRKRKKRT
+NRARRNRRRVR
+NRRMKWKK
+NSGTMQSASRAT
+NYTTYKSHFQDR
+PARAARRAARR
+PFVYLI
+PIRRRKKLRRLK
+PKKKRKV
+PKKKRKVALWKTLLKKVLKA
+PLSSIFSRIGDP
+PMLKE
+PNTRVRPDVSF
+PPHNRIQRRLNM
+PPKKSAQCLRYKKPE
+PPRLPRPRPRPLPFPRPG
+PPRLRKRRQLNM
+PQNRLQIRRHSK
+PRPLPFPRPG
+PRPPRLPRPRPRPLPFPRPG
+PRPRPLPFPRPG
+PRPRPRPLPFPRPG
+PSKRLLHNNLRR
+PSSSSSSRIGDP
+QAASRVENYMHR
+QIISRDLISH
+QIKIWFQNRRMKWKK
+QLALQLALQALQAALQLA
+QLPVM
+QNRRMKWKK
+QPIIITSPYLPS
+QQHLLIAINGYPRYN
+QRIRKSKISRTL
+QSPTDFTFPNPL
+QTRRRERRAEKQAQW
+QWQRNMRKVR
+QWQRNMRKVRGPPVSCIKR
+RAGLQFPVGRVHRLLRK
+RAIKIWFQNRRMKWKK
+RAKRRQRRR
+RAWMRWYSPTTRRYG
+RGGRLAYLRRRWAVLGR
+RGGRLSYSRRRFSTSTGR
+RGSRRAVTRAQRRDGRRRRRSRRESYSVYVYRVLRQ
+RHIKIWFQNRRMKWKK
+RIFIGC
+RIFIHFRIGC
+RIFIRIGC
+RIKAERKRMRNRIAASKSRKRKLERIARGC
+RILQQLLFIHF
+RILQQLLFIHFRIGC
+RILQQLLFIHFRIGCRH
+RILQQLLFIHFRIGCRHSRI
+RIRMIQNLIKKT
+RKARRQRRR
+RKKARQRRR
+RKKRAQRRR
+RKKRRARRR
+RKKRRQARR
+RKKRRQR
+RKKRRQRAR
+RKKRRQRR
+RKKRRQRRA
+RKKRRQRRR
+RKKRRQRRRPPQCAAVALLPAVLLALLAP
+RKKRRRESRKKRRRES
+RKKRRRESRKKRRRESC
+RKKRRRESRRARRSPRHL
+RLAMRWYSPTTRRYG
+RLFMRFYSPTTRRYG
+RLIMRIYSPTTRRYG
+RLLMRLYSPTTRRYG
+RLPRPRPRPLPFPRPG
+RLSGMNEVLSFRWL
+RLVMRVYSPTTRRYG
+RLWARWYSPTTRRYG
+RLWMAWYSPTTRRYG
+RLWMRAYSPTTRRYG
+RLWMRWASPTTRRYG
+RLWMRWYAPTTRRYG
+RLWMRWYSPATRRYG
+RLWMRWYSPTARRYG
+RLWMRWYSPTTARYG
+RLWMRWYSPTTRAYG
+RLWMRWYSPTTRRAG
+RLWMRWYSPTTRRYA
+RLWMRWYSPTTRRYG
+RLWMRWYSPWTRRWG
+RLWMRWYSPWTRRYG
+RLWRALPRVLRRLLRP
+RLYMRYYSPTTRRYG
+RMKWKK
+RNRSRHRR
+RQAKIWFQNRRMKWKK
+RQARRNRRRALWKTLLKKVLKA
+RQARRNRRRC
+RQGAARVTSWLGRQLRIAGKRLEGRSK
+RQIAIWFQNRRMKWKK
+RQIKAWFQNRRMKWKK
+RQIKIAFQNRRMKWKK
+RQIKIFFQNRRMKFKK
+RQIKIFFQNRRMKWKK
+RQIKIW
+RQIKIWAQNRRMKWKK
+RQIKIWFANRRMKWKK
+RQIKIWFPNRRMKWKK
+RQIKIWFQ
+RQIKIWFQARRMKWKK
+RQIKIWFQN
+RQIKIWFQNARMKWKK
+RQIKIWFQNMRRKWKK
+RQIKIWFQNR
+RQIKIWFQNRAMKWKK
+RQIKIWFQNRR
+RQIKIWFQNRRAKWKK
+RQIKIWFQNRRM
+RQIKIWFQNRRMAWKK
+RQIKIWFQNRRMK
+RQIKIWFQNRRMKAKK
+RQIKIWFQNRRMKW
+RQIKIWFQNRRMKWAK
+RQIKIWFQNRRMKWK
+RQIKIWFQNRRMKWKA
+RQIKIWFQNRRMKWKK
+RQIKIWFQNRRMKWKKDIMGEWGNEIFGAIAGFLG
+RQIKIWFQNRRMKWKKTYADFIASGRTGRRNAI
+RQIRIWFQNRRMRWRR
+RQLRIAGRRLRGRSR
+RQPKIWFPNRRKPWKK
+RQRSRRRPLNIR
+RRHHCRSKAKRSR
+RRIPNRRPRR
+RRIRPRP
+RRIRPRPPRLPRPRP
+RRIRPRPPRLPRPRPRP
+RRIRPRPPRLPRPRPRPLPFPRPG
+RRKLSQQKEKK
+RRLSYSRRRF
+RRMKWKK
+RRQRRTSKLMKR
+RRRERRAEK
+RRRQRRKKR
+RRRQRRKRGGDIMGEWGNEIFGAIAGFLG
+RRRR
+RRRRNRTRRNRRRVRGC
+RRRRR
+RRRRRR
+RRRRRRR
+RRRRRRRR
+RRRRRRRRR
+RRRRRRRRRRR
+RRRRRRRRRRRR
+RRRRRRRRRRRRRRRR
+RRRRRRRRRRRTYADFIASGRTGRRNAI
+RRRRRRRW
+RRVTSWLGRQLRIAGKRLEGRSK
+RRWRRWWRRWWRRWRR
+RSVTTEINTLFQTLTSIAEKVDP
+RTLVNEYKNTLKFSK
+RTRRNRRRVR
+RVIRVWFQNKRCKDKK
+RVIRWFQNKRCKDKK
+RVIRWFQNKRSKDKK
+RVREWWYTITLKQES
+RVRILARFLRTRV
+RVRSWLGRQLRIAGKRLEGRSK
+RVRVFVVHIPRLT
+RVTSWLGRQLRIAGKRLEGRSK
+RWRWKCCKK
+SAETVESCLAKSH
+SARHHCRSKAKRSRHH
+SATGAPWKMWVR
+SFHQFARATLAS
+SGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKG
+SGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGC
+SHAFTWPTYLQL
+SHNWLPLWPLRP
+SKKKKTKV
+SKRTRQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKDR
+SLGWMLPFSPPF
+SMLKRNHSTSNR
+SNPWDSLLSVST
+SPMQKTMNLPPM
+SRAHHCRSKAKRSRHH
+SRRAHCRSKAKRSRHH
+SRRARRSPRESGKKRKRKR
+SRRARRSPRHLGSG
+SRRHACRSKAKRSRHH
+SRRHHARSKAKRSRHH
+SRRHHCRAKAKRSRHH
+SRRHHCRSAAKRSRHH
+SRRHHCRSKAARSRHH
+SRRHHCRSKAKASRHH
+SRRHHCRSKAKRARHH
+SRRHHCRSKAKRSAHH
+SRRKRQRSNMRI
+SRWRWKCCKK
+SRWRWKCSKK
+SRWRWKSCKK
+SRWRWKSSKK
+SSSIFPPWLSFF
+SWAQHLSLPPVL
+SWLPYPWHVPSS
+SWWTPWHVHSES
+SYIQRTPSTTLP
+TAKTRYKARRAELIAERRGC
+TARRITPKDVIDVRSVTTEINT
+TFPQTAIGVGAP
+TKAARITPKDVIDVRSVTTEINT
+TKRRITPDDVIDVRSVTTEINT
+TKRRITPKDVIDV
+TKRRITPKDVIDVESVTTEINT
+TKRRITPKDVIDVRSVTTEINT
+TKRRITPKDVIDVRSVTTKINT
+TKRRITPKKVIDVRSVTTEINT
+TLPSPLALLTVH
+TPKTMTQTYDFS
+TRQARRNRRRRWRERQR
+TRQARRNRRRRWRERQRGC
+TRRQRTRRARRNRGC
+TRRSKRRSHRKF
+TRSSRAGLQWPVGRVHRLLRKGGC
+TSHTDAPPARSP
+TSPLNIHNGQKL
+VELPPPVELPPPVELPPP
+VHLPPP
+VHLPPPVHLPPP
+VHLPPPVHLPPPVHLPPP
+VIRVHFRLPVRTV
+VKLPPP
+VKLPPPVKLPPP
+VKLPPPVKLPPPVKLPPP
+VKRGLKLRHVRPRVTRMDV
+VKRKKKPALWKTLLKKVLKA
+VLGQSGYLMPMR
+VNADIKATTVFGGKYVSLTTP
+VPALK
+VPALR
+VPMIK
+VPMLK
+VPTLE
+VPTLK
+VPTLQ
+VQAILRRNWNQYKIQ
+VQRKRQKLMP
+VRLPPP
+VRLPPPVRLPPP
+VRLPPPVRLPPPVRLPPP
+VRRFLVTLRIRRA
+VSALK
+VSGKK
+VSKQPYYMWNGN
+VSLKK
+WEAALAEALAEALAEHLAEALAEALEALAA
+WEAKLAKALAKALAKHLAKALAKALKACEA
+WFQNRRMKWKK
+WIIFKIAASHKK
+WIIFRAAASHKK
+WIIFRALISHKK
+WIIFRIAASHKK
+WIIFRIAATHKK
+WIIFRIAAYHKK
+WKCRRQCFRVLHHWN
+WLRRIKAWLRRIKALNRQLGVAA
+WRFKAAVALLPAVLLALLAP
+WRFKKSKRKV
+WRFKWRFK
+WRFKWRFKWRFK
+WRWRWRWRWRWRWR
+YARAAARQARA
+YARAARRAARR
+YAREARRAARR
+YARKARRAARR
+YEREARRAARR
+YGRAARRAARR
+YGRKKKRRQRRR
+YGRKKRRQRRR
+YGRKKRRQRRRGCYGRKKRRQRRRG
+YGRRARRAARR
+YGRRARRRARR
+YGRRARRRRRR
+YGRRRRRRRRR
+YIVLRRRRKRVNTKRS
+YKQCHKKGGKKGSG
+YKRAARRAARR
+YKRKARRAARR
+YPRAARRAARR
+YPYDANHTRSPT
+YRFK
+YRFKYRFKYRLFK
+YRRAARRAARA
+YRRRRRRRRRR
+YSHIATLPFTPT
+YTAIAWVKAFIRKLRK
+YTQDFNKFHTFPQTAIGVGAP
+YYYAAGRKRKKRT

Datasets/Natural CPPs/Experimental_high_uptake.txt

@@ -0,0 +1,187 @@
+AAYLLAKINLKALAALAKKIL
+AEKVDPVKLNLTLSAAAEALTGLGDK
+AGYLLGKINLKALAALAKKIL
+AGYLLGKINLKALAALAKKILTYADFIASGRTGRRNAI
+AGYLLGKINLKPLAALAKKIL
+AGYLLGKINLRALAALARRIL
+AGYLLGPINLKALAALAKKIL
+AQIKIWFQNRRMKWKK
+CRFRFKCCKK
+CRFRWKCCKK
+CRWRFKCCKK
+CRWRWKCCKK
+CRWRWKCG
+CRWRWKCGCKK
+CRWRWKCSKK
+DCRWRWKCCKK
+DSLKSYWYLQKFSWR
+EEEAAGRKRKKRT
+EKRPRTAFSSEQLARLKREFNENRYLTTERRRQQLSSELGLNEAQIKIWFQNKRAKIKKST
+FITKALGISYGRKKRRQRRRPPQ
+FLGKKFKKYFLQLLK
+FLIFIRVICIVIAKLKANLMCKT
+FQNRRMKWKK
+FVTRGCPRRLVARLIRVMVPRR
+GIGKFLHSAKKWGKAFVGQIMNC
+GKKKKRKREKL
+GLRKRLRKFRNKIKEK
+GPFHFYQFLFPPV
+GRKKRRQRARPPQC
+GRKKRRQRRPPQC
+GRKKRRQRRR
+GRKKRRQRRRC
+GRKKRRQRRRPPQ
+GRKKRRQRRRPPQTYADFIASGRTGRRNAI
+GRKKRRQRRRPWQ
+GRKRKKRT
+GRRRRRRRRRPPQ
+GSPWGLQHHPPRT
+GTKMIFVGIKKKEERADLIAYLKKA
+GWTLNSAGYLLGKINLKALAALAKKIL
+GWTLNSAGYLLGKLKALAALAKKIL
+GYGNCRHFKQKPRRD
+HHHHHHTKRRITPKDVIDVRSVTTEINT
+IKIWFQNRRMKWKK
+IPMIK
+IPSRWKDQFWKRWHY
+IWFQNRRMKWKK
+KALAALLKKLAKLLAALK
+KALAALLKKWAKLLAALK
+KALAKALAKLWKALAKAA
+KALKKLLAKWLAAAKALL
+KCCKWRWRCK
+KCFQWQRNMRKVRGPPVSC
+KCFQWQRNMRKVRGPPVSCIKR
+KCGCRWRWKCGCKK
+KCRWRWKCCKK
+KDCRWRWKCCKK
+KGKKIFIMK
+KIWFQNRRMKWKK
+KKICTRKPRFMSAWAQ
+KKWKMRRNQFWIKIQR
+KLAAALLKKWKKLAAALL
+KLALKLALKALKAALK
+KLALKLALKALKAALKLA
+KLALKLALKALKAALKLAGC
+KLALKLALKAWKAALKLA
+KLALQLALQALQAALQLA
+KLPVM
+KLTRAQRRAAARKNKRNTRGC
+KLWMRWYSATTRRYG
+KLWMRWYSPTTRRYG
+KLWMRWYSPWTRRYG
+KMDCRWRPKCCKK
+KMDCRWRWKCCKK
+KMDCRWRWKCKK
+KMDCRWRWKCSKK
+KMDCRWRWKKK
+KMDCRWRWKSCKK
+KMDSRWRWKCSKK
+KMTRAQRRAAARRNRWTARGC
+KNAWKHSSCHHRHQI
+KRVSRNKSEKKRR
+KRWRWKCCKK
+KTVLLRKLLKLLVRKI
+LGISYGRKKRRQRRRPPQ
+LKTLATALTKLAKTLTTL
+LLIILARRIRKQAHAHSK
+LLIILRARIRKQAHAHSK
+LLIILRRAIRKQAHAHSK
+LLIILRRRIARKQAHAHSK
+LLIILRRRIRAQAHAHSK
+LLIILRRRIRKAAHAHSK
+LLIILRRRIRKQAHAASK
+LLIILRRRIRKQAHAHAK
+LLIILRRRIRKQAHAHSA
+LLKKRKVVRLIKFLLK
+LNSAGYLLGKINLKALAALAKKIL
+MDCRWRWKCCKK
+MVRRFLVTLRIRRACGPPRVRV
+MVTVLFRRLRIRRACGPPRVRV
+NAKTRRHERRRKLAIERGC
+NRRMKWKK
+PMLKE
+PRPLPFPRPG
+QIKIWFQNRRMKWKK
+QLALQLALQALQAALQLA
+QNRRMKWKK
+QQHLLIAINGYPRYN
+RAIKIWFQNRRMKWKK
+RAWMRWYSPTTRRYG
+RIKAERKRMRNRIAASKSRKRKLERIARGC
+RKKRRARRR
+RKKRRQRR
+RKKRRQRRR
+RKKRRRESRKKRRRES
+RLAMRWYSPTTRRYG
+RLFMRFYSPTTRRYG
+RLIMRIYSPTTRRYG
+RLVMRVYSPTTRRYG
+RLWARWYSPTTRRYG
+RLWMRWASPTTRRYG
+RLWMRWYAPTTRRYG
+RLWMRWYSPATRRYG
+RLWMRWYSPTARRYG
+RLWMRWYSPTTRRAG
+RLWMRWYSPTTRRYA
+RLWMRWYSPTTRRYG
+RLWMRWYSPWTRRYG
+RLYMRYYSPTTRRYG
+RQAKIWFQNRRMKWKK
+RQIAIWFQNRRMKWKK
+RQIKAWFQNRRMKWKK
+RQIKIAFQNRRMKWKK
+RQIKIFFQNRRMKFKK
+RQIKIWAQNRRMKWKK
+RQIKIWFANRRMKWKK
+RQIKIWFPNRRMKWKK
+RQIKIWFQARRMKWKK
+RQIKIWFQNARMKWKK
+RQIKIWFQNRAMKWKK
+RQIKIWFQNRRAKWKK
+RQIKIWFQNRRMK
+RQIKIWFQNRRMKAKK
+RQIKIWFQNRRMKW
+RQIKIWFQNRRMKWK
+RQIKIWFQNRRMKWKK
+RQIKIWFQNRRMKWKKTYADFIASGRTGRRNAI
+RQIRIWFQNRRMRWRR
+RQPKIWFPNRRKPWKK
+RRIRPRPPRLPRPRP
+RRMKWKK
+RRRQRRKKR
+RRRRNRTRRNRRRVRGC
+RRRRRR
+RRRRRRR
+RRRRRRRR
+RRRRRRRRR
+RRRRRRRRRRR
+RRRRRRRRRRRTYADFIASGRTGRRNAI
+RTLVNEYKNTLKFSK
+RVIRVWFQNKRCKDKK
+RVREWWYTITLKQES
+RVRVFVVHIPRLT
+RWRWKCCKK
+SKRTRQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKDR
+SRWRWKCCKK
+TKRRITPKDVIDVRSVTTEINT
+TKRRITPKDVIDVRSVTTKINT
+TKRRITPKKVIDVRSVTTEINT
+TRQARRNRRRRWRERQR
+TRQARRNRRRRWRERQRGC
+TRRQRTRRARRNRGC
+TRSSRAGLQWPVGRVHRLLRKGGC
+VELPPPVELPPPVELPPP
+VKLPPPVKLPPPVKLPPP
+VPALK
+VPALR
+VPMLK
+VPTLE
+VPTLK
+VPTLQ
+VRLPPPVRLPPPVRLPPP
+VRRFLVTLRIRRA
+VSALK
+WFQNRRMKWKK
+WKCRRQCFRVLHHWN
+YIVLRRRRKRVNTKRS

Datasets/Non-CPPs/Experimental.txt

@@ -0,0 +1,34 @@
+AGCKNFFWKTFTSC
+AHALCLTERQIKSNRRMKWKKEN
+CYFQNCPRG
+DFDMLRCMLGRVYRPCWQV
+EILLPNNYNAYESYKYPGMFIALSK
+FITKALGISYGRKKRRQC
+FVPIFTHSELQKIREKERNKGQ
+GRKKRRQPPQC
+GWTLNSAGYLLGKFLPLILRKIVTAL
+GWTLNSAGYLLGKINLKAPAALAKKIL
+GWTLNSAGYLLGPHAI
+GWTNLSAGYLLGPPPGFSPFR
+HDEFERHAEGTFTSDVSSYLEGQAAKEFIAWLVKGR
+IAARIKLRSRQHIKLRHL
+ILRRRIRKQAHAHSK
+KIWFQNRRMK
+KKKQYTSIHHGVVEVD
+KKLSECLKRIGDELDS
+KLALKALKAALKLA
+KLALKLALKALKAA
+LLGKINLKALAALAKKIL
+LLKTTALLKTTALLKTTA
+LLKTTELLKTTELLKTTE
+LNSAGYLLGKALAALAKKIL
+LNSAGYLLGKLKALAALAK
+LRKKKKKH
+PVVHLTLRQAGDDFSR
+QNLGNQWAVGHLM
+RPPGFSPFR
+RQIKIFFQNRRMKFKK
+RQIKIWFQNRRM
+RQIKIWFQNRRMKWK
+TERQIKIWFQNRRMK
+WSYGLRPG

Datasets/Non-CPPs/Generated.txt

@@ -0,0 +1,111 @@
+PQNVTLYQIIWLFMQKTT
+MPVMFYFSARNEVALVLVYFNFMIMMMH
+QYVNRDKEHCNKN
+IHSHWFVMVLKGKAARQRDDLWTHPCFPS
+AITFYPFAPNQITCIHE
+LMLRTVGYKFHCSLPVNAVHCSLK
+FKMHEN
+DMGNRMMHCFTDNASRDGFHINWTSVLHPARCE
+QIFWDSRHPSQH
+SNGHACRPW
+QNDWQSVPLHQNYKKTPTQVY
+QLCGTGRITYHPFCAGDWC
+VQQLQWYQNNLVENF
+RNVLFMEHNEKSCTG
+MIEMAM
+DQEFRRENS
+CACMKGMSYG
+ARFSNPGVWSKVAADIFNMALDTALA
+KNIEATSIDSLMCRWRSKVGVGCLYRFYIRT
+AEYQMHAWSPMCYSPTEWKYYIWDMMS
+VIVYIVVKDASSK
+PRKNDFAMSSCPAKVAGPTF
+QGARNYKCCFAWC
+IMGIKYWAFMFPQANSAPCTYQ
+CPTFQYFPHDIVLQSTNYVSADEASLRI
+DRTHPIT
+DFFGKMIFHHSDAIFPLRNQDEERMD
+QAHVHVWHKYSVKTVYH
+VCMCWQQGHRIEYNRGKRNLFKSLHYYYVTW
+ICITRRSICMVTCNKEWPQNRNAHTFLI
+APVTGAHMAYVDYWVPCQFTECSGEYVTEEYRKA
+MDMVAIDDQDYIMCHF
+KFVYKEFMQNPDPKEARHCNPHDD
+GHHSLKITDDPFDVPFPINDDHDS
+VDFEEAYLAVS
+DICGTWDTLDL
+SEKFCCVY
+YFQDNMA
+SQIWVIRLTWAVQMTDFMHDMQQ
+QKVAFCDCCYDDIYTVEFKGCIFRPK
+YGAGLN
+CWGGCRDWFCNT
+PNWVDLT
+TCCCNPEIHCLSHHH
+TPFFLFQQDTYMSHY
+QFHVHTDGYHNHNLVNMTRIT
+LASTFWLIMNLVGSWISL
+DKLGVWFIWANNASVFHAYHLKC
+TMVEPFKLCFD
+TTWCLHRMGSCHV
+WKATVPWCEFSDEMMSHSARP
+CPLDQFECGGDEPG
+MPYQPKYFLQYICN
+PMGPCSFARYCQDMGWRYDNPGRFNGKAKLF
+GGLTVYNQATR
+FNKIRGMPSWRDWFWKSPAVFNFISQQIAN
+HFADGKVVYTKLMTWKTQDL
+RFGFFPMDQPGTGWT
+FQAYPCITAYKVMYID
+SHMMGEFWGDEDMCYRHQRSYET
+HGLNIHYVFLWHI
+YMVGLCDYHILYSGWGQMDWHPEPHFYAWMYR
+VPTCDFQHSCFTTNRYEASDHKAIEHP
+MRYDQHYPLLPLDHRYWEIINFLMYMTTEQCTSW
+PLDGMCDKGNYTQ
+VWCIRSWKITS
+AVMITN
+YGLFSHCFQCSIMPTGL
+PLDLPCRYKNQSLHKWLMKRLYMVRW
+SMTLRQCHNPSHLTAFGWHWNMFL
+ITQVGRHWHNWFVGVPTAAVKIYGTDA
+TNRSK
+YGFMELFDDVTAIFSIDHCQEEYYEQMANNVM
+VCWAHCIIALWMYNFCFP
+TAQVFFNVYKKAKPN
+NVEAIKMWWFFLARTDK
+PDEIGGKFPTAYVQDYLINPE
+GMNCSREYAHCTSAYV
+NGERPEVLPDTSPWWWLWVIMSQPRHVWSF
+MVMEMRNF
+EMMSRTKMWITQKYSTFF
+AVNANFGWQDKRFSTFG
+QRNFKA
+REERFDCEYRPDHLQVSEITVDWRMK
+TLISLFWWMESWEQTVNPPMSRIFREPKMPFEE
+MLVDEQVSRKRHAGKRPKMH
+TGRWGEDCEDQNSARLMVP
+VVRNDQGYVDDQSPCEKMKVTKKTLTLQG
+RVREQQAMCHLVWKSFDEDLD
+QSGAKPGHCEWQSTHLKNCEKVNDIRQPPHHQRS
+PLGPVVHKCCPGFGGLQWLPLLWNWYQNMWGN
+QIMISA
+KHVNVTHDKMRHCQPD
+WCFYLIHVMWWRMGDGQWFCISWDDSYKR
+HPTIIVAFAGIWSYQCWCPEE
+DIIIKMRHWPVAKLFVPPERDNAYWFCHYYCR
+MEPLWWANYDNTQ
+MNARIALAPMFRRRRYN
+NWVTMKDSADSIDHECPRYFDTCERSCKISE
+QEHDYGNLDLCN
+MLTPSLEWTKKWV
+LEIHYQEPWLNMM
+NSDMAHERKFMWQYNR
+EGFRKGHELCHYCKM
+PTVEHISGNQIAICSWWRRVCITLKHHPYIEHGN
+SYNTF
+YFWDDFRYDIFMERVVMHF
+RFVHNC
+VNYEEKWVHAKCHHIHVHNYDASEWKSETYCSHP
+CCNHMCTGINVPYSKSTVNEEHQNYL
+YTMQMLLEIHRKNW

Datasets/Non-Natural CPPs/CPPBase_modified.fasta

@@ -0,0 +1,582 @@
+>cpp_R9-GO-203
+rrrrrrrrrcqcrrkn
+>cpp_NF51
+AGYLLGOINLKALAALAKKIL
+>cpp_NF53
+AGYLLGKINLKALAALAKKIL
+>cpp_NF61
+AGYLLGKINLKALAALAKKIL
+>cpp_P1
+RGD-ADDA-RRRRRRRR
+>cpp_P2
+RGD-Ahx-RRRRRRRR
+>cpp_P3
+RGD-RRRRRRRR
+>cpp_Peptide599
+GLFEAIEGFIENGWEGMIDGWYGGGGrrrrrrrrrK
+>cpp_9R
+rrrrrrrrr
+>cpp_LB1_1
+RXRRXRILFQYRXRRXR
+>cpp_LB1_2
+RXRRXRYQFLIRXRRXR
+>cpp_LB1_3
+RXRRXRFLQIYRXRRXR
+>cpp_LB1_4
+RXRRXRAAAAARXRRXR
+>cpp_LB1_5
+RXRRXRIKFQYRXRRXR
+>cpp_LB1_6
+RXRRXRIEFQYRXRRXR
+>cpp_LB1_7
+RXRRXRIWFQYRXRRXR
+>cpp_LB1_8
+RXRRXRIPFQYRXRRXR
+>cpp_LB1_9
+KXRKXRILFQYKXRKXR
+>cpp_LB1_10
+HXRHXRILFQYHXRHXR
+>cpp_LB1_11
+SXRSXRILFQYSXRSXR
+>cpp_LB1_12
+EXREXRILFQYEXREXR
+>cpp_LB1_13
+RMKWKKILFQYRXRRXR
+>cpp_LB1_14
+RXRRXRILFQYRMKWKK
+>cpp_LB1_15
+KKWKMRILFQYRXRRXR
+>cpp_LB1_16
+RXRRXRILFQYKKWKMR
+>cpp_[D]-K6L9
+LKlLKkLlkKLLkLL
+>cpp_2b
+RLLRLLRLX
+>cpp_3b
+RLLRLXRLX
+>cpp_4b
+RLXRLXRLX
+>cpp_5b
+RLXRLXRXX
+>cpp_6b
+RLXRXRXX
+>cpp_7b
+RXXRXRXX
+>cpp_Penetratin
+rqikiwfqnrrmkwkk
+>cpp_hLFHcy
+K-Hey-FQWQRNMRKVRGPPVS-Hey-IKR
+>cpp_PF23
+WLOLLOOWLOLWOOLLOLW
+>cpp_PF24
+WLOLLROWLRLWORLLOLW
+>cpp_PF25
+WLRLLORWLOLWROLLRLW
+>cpp_PF26
+WLKY(PO3)LLKKWLKLWKKLLKLW
+>cpp_PF27
+Y(PO3)WLKLLKKWLKLWKKLLKLW
+>cpp_FAM-1
+BRRXRRXRRX
+>cpp_entFAM-1
+BrrXrrXrrX
+>cpp_FAM-2
+BRrXRrXRrX
+>cpp_FAM-3
+BXRXRXXRXRXXRXRX
+>cpp_cFΦR4-Rho
+Cyclo(FΦRRRRQ)
+>cpp_cFΦR4-Dex
+Cyclo(FΦRRRRQ)
+>cpp_cFΦR4-FITC
+Cyclo(FΦRRRRQ)
+>cpp_cFΦR4-R5
+Cyclo(FΦRRRRQ)
+>cpp_cFΦR4-A5
+Cyclo(FΦRRRRQ)
+>cpp_cFΦR4-F4
+Cyclo(FΦRRRRQ)
+>cpp_cFΦR4-PCP
+Cyclo(FΦRRRRQ)
+>cpp_bicyclo(FΦR4-A5)Rho
+Cyclo(FΦRRRRQ)
+>cpp_bicyclo(FΦR4-A7)Rho
+Cyclo(FΦRRRRQ)
+>cpp_bicyclo(FΦR4-RARAR)Rho
+Cyclo(FΦRRRRQ)
+>cpp_bicyclo(FΦR4-DADAD)Rho
+Cyclo(FΦRRRRQ)
+>cpp_monocyclo(FΦR4-A5)Rho
+Cyclo(FΦRRRRQ)
+>cpp_monocyclo(FΦR4-A7)Rho
+Cyclo(FΦRRRRQ)
+>cpp_Xentrypeptides
+lclrpvg
+>cpp_Xentrypeptides
+lclrp
+>cpp_Xentrypeptides
+lclr
+>cpp_Xentrypeptides
+lcl
+>cpp_Xentrypeptides
+icir
+>cpp_Xentrypeptides
+vcvr
+>cpp_Xentrypeptides
+vlclr
+>cpp_Pip6a
+RXRRBRRXRYQFLIRXRBRXRB
+>cpp_MCaUF1-9-C-Cy5
+GD(Abu)LPHLKLC
+>cpp_NF51
+AGYLLG)δ-OINLKALAALAKKIL
+>cpp_Penetratin
+rqikiwfqnrrmkwkk
+>cpp_D-SFTI-1
+grctksippicfpd
+>cpp_SFTI-M6
+GRXTKSIPPIXFPD
+>cpp_SFTI-M7
+GRXTKSIPPIXFPD
+>cpp_PeptideI
+RXRRXRRXRRXR
+>cpp_PeptideII
+RXRRXRRXRRXR
+>cpp_PeptideIII
+RXRRXRRXRRXR
+>cpp_PeptideIV
+RXRRXRRXRRXR
+>cpp_PeptideV
+RXRRXRRXRRXR
+>cpp_Transportan
+GWTLNSAGYLLGKINLKALAALAKKIL
+>cpp_TP10
+AGYLLGKINLKALAALAKKIL
+>cpp_R8-RGD-lipo
+RRRRRRRR-c(RGDfK)
+>cpp_Singlemitochondrialpenetratingpeptide
+FrFKFrFK
+>cpp_R8
+RRRRRRRR
+>cpp_Tat
+YGRKKRRQRRR
+>cpp_probe1
+MGVADLIKKFESISKEEGGGGK(Ahx-FITC)-GGrRrRrRRR
+>cpp_probe2
+MGVADLIKKFESISKEEGGGGK(RhB)GGrRrRrRRR
+>cpp_probe3
+MGVADLIKKFESISKEEGGGGK(PA-RhB)GGrRrRrRRR
+>cpp_TP-biot13
+GWTLNSAGYLLGKINLKALAALAKKIL
+>cpp_cTAT-GFP
+rRrGrKkRr
+>cpp_TAT-GFP
+rRrGrKkRr
+>cpp_RVG-9DR
+rrrrrrrrr
+>cpp_CF-sC18(NIA)
+B-GLRK(NIA)RLRKFRNKIKEK
+>cpp_DOTA-sC18
+B-GLRKRLRKFRNKIKEK
+>cpp_DOTA-sC18(NIA)
+B-GLRK(NIA)RLRKFRNKIKEK
+>cpp_(RX)8B
+RXRXRXRXRXRXRXRXB
+>cpp_(RX)8B
+RXRXRXRXRXRXRXRXB
+>cpp_(RX)8B
+RXRXRXRXRXRXRXRXB
+>cpp_(RXR)4BR
+RXRRXRRXRRXRXB
+>cpp_(RXRRBR)2XB
+RXRRBRRXRRBRXB
+>cpp_TAM-iMP
+inlkalaalakkil
+>cpp_TAM-riMP
+likkalaalaklni
+>cpp_TAM-MitP
+INLKKLAKL(Aib)KKIL
+>cpp_TAM-iMitP
+inlkklakl(Aib)kkil
+>cpp_TAM-rMitP
+LIKK(Aib)LKALKKLNI
+>cpp_TAM-riMitP
+likk(Aib)lkalkklni
+>cpp_(Fxr)3
+FXrFXrFXr
+>cpp_(Fxr)4
+FXrFXrFXrFXr
+>cpp_(Fxr)5
+FXrFXrFXrFXrFXr
+>cpp_(Fxr)6
+FXrFXrFXrFXrFXrFXr
+>cpp_r8
+rrrrrrrrGC
+>cpp_r12
+rrrrrrrrrrrrGC
+>cpp_γ-AApeptide(mimeticofTat)
+GRKKRRQRRR
+>cpp_PEG-PasΔPKR8(Alexa)
+FFLIGRRRRRRRRGC
+>cpp_PEG-PasΔPKR8(Alexa)
+FFLIGRRRRRRRRGC
+>cpp_PEG-PasΔPKR8(Alexa)
+FFLIGRRRRRRRRGC
+>cpp_dR8-p53C'
+rrrrrrrr
+>cpp_dPasR8-p53C'
+fflipkgrrrrrrrr
+>cpp_dF4R8-p53C'
+ffffgrrrrrrrrgc
+>cpp_dR12-p53C'
+rrrrrrrrrrrr
+>cpp_(R-Ahx-R)4_amide_CF(I)
+RXRRXRRXRRXR
+>cpp_(r-ahx-r)4_carbamate_CF(II)
+rXrrXrrXrrXr
+>cpp_(r-ahx-r-r-apr-r)2_carbamate_CF(III)
+rXrrXrrXrrXr
+>cpp_r8_carbamate_CF15(VI)
+rrrrrrrr
+>cpp_PF14
+AGYLLGKLLOOLAAAALOOLL
+>cpp_rR7
+rRRRRRRR
+>cpp_(rR)2R4
+rRrRRRRR
+>cpp_(rR)3R2
+rRrRrRRR
+>cpp_(rR)4
+rRrRrRrR
+>cpp_r2(rR)3
+rrrRrRrR
+>cpp_r8
+rrrrrrrr
+>cpp_Polyguanidinecomparators2
+Nbtg-Nbtg-Nbtg-Nbtg-Nbtg-Nbtg-Nbtg-Nbtg
+>cpp_NLys(1/3)variants1
+NLys-Nspe-Nspe-NLys-Nspe-Nspe-NLys-Nspe-Nspe
+>cpp_NLys(1/3)variants2
+NLys-Nspe-Nspe-NLys-Nspe-Nspe-NLys-Nspe-Nspe-NLys-Nspe-Nspe
+>cpp_NLys(1/3)variants3
+NLys-Npm-Npm-NLys-Npm-Npm-NLys-Npm-Npm-NLys-Npm-Npm
+>cpp_NLys(1/3)variants4
+NLys-Nssb-Nssb-NLys-Nssb-Nssb-NLys-Nssb-Nssb-NLys-Nssb-Nssb
+>cpp_NLys(2/3)variants1
+NLys-NLys-Nspe-NLys-NLys-Nspe-NLys-NLys-Nspe-NLys-NLys-Nspe
+>cpp_NLys(2/3)variants2
+NLys-NLys-NLys-NLys-NLys-NLys-NLys-NLys-Nspe-Nspe-Nspe-Nspe
+>cpp_NLys(2/3)variants3
+NLys-NLys-NLys-NLys-NLys-NLys-NLys-NLys-NLeu-NLeu-NLeu-NLeu-Nleu
+>cpp_Guanidylatedvariants
+Nbtg-Nspe-Nspe-Nbtg-Nspe-Nspe-Nbtg-Nspe-Nspe-Nbtg-Nspe-Nspe
+>cpp_Guanidylatedvariants
+Nbtg-Nbtg-Nspe-Nbtg-Nbtg-Nspe-Nbtg-Nbtg-Nspe-Nbtg-Nbtg-Nspe
+>cpp_Tat-OH
+YGRKKRRQRRR-acp-OH
+>cpp_Tat-ENAEYLR
+YGRKKRRQRRR-acp-ENAEYLR
+>cpp_Tat-QNAQYLR
+YGRKKRRQRRR-acp-QNAQYLR
+>cpp_Tat-DYQQD
+YGRKKRRQRRR-acp-DYQQD
+>cpp_Tat-NYQQN
+YGRKKRRQRRR-acp-NYQQN
+>cpp_d-R8-C6-NP
+rrrrrrrr
+>cpp_d-R8-INS-NP
+rrrrrrrr
+>cpp_R7
+B-RRRRRRR
+>cpp_C12R9
+Lauroyl-B-RRRRRRRRR
+>cpp_C12dR9
+Lauroyl-B-rrrrrrr
+>cpp_C12dR9-1
+Lauroyl-B-rrrrr-RRRR
+>cpp_C12dR9-2
+Lauroyl-B-RRRR-rrrrr
+>cpp_C14R11
+Myristoyl-B-RRRRRRRRRRR
+>cpp_C14dR11
+Myristoyl-B-rrrrrrrrrrr
+>cpp_TP102GL
+A-CF3-Bpg-LYLLGKINLKALAALAKKIL
+>cpp_TP104LL
+AGY-CF3-Bpg-LGKINLKALAALAKKIL
+>cpp_TP102GD
+a-CF3-Bpg-lyllgkinlkalaalakkil
+>cpp_TP104LD
+agy-CF3-Bpg-lgkinlkalaalakkil
+>cpp_NrTP2
+YKQCHKKGG-Ahx-KKGSG
+>cpp_NrTP5
+ykqchkkGGkkGsG
+>cpp_artifcialCPP
+VGAlAvVvWlWlWlWbA-GSG-PKKKRKVC
+>cpp_MAP(Aib)
+KLULKLULKULKAULKLU
+>cpp_Mitoparan(MitP)
+INLKKLAKL(Aib)KKIL
+>cpp_Inversomitoparan(iMitP)
+inlkklakl(Aib)kkil
+>cpp_Inversomastoparan(iMP)
+inlkalaalakkil
+>cpp_MMD68
+Me-RKKRRRESWVHLPPPVHLPPPGGHHHHHH
+>cpp_JB434
+RRRRRRRRRGGLAA(Aib)SGWKHHHHHH
+>cpp_Oligoarginine
+rrrrrrrr
+>cpp_PF15
+AGYLLGKLLOOLAAAALOOLL
+>cpp_PF14
+AGYLLGKLLOOLAAAALOOLL
+>cpp_PF6
+AGYLLGKINLKALAALAKKIL
+>cpp_TV-XIIa
+Aib-NII-Aib-PLL-Aib-PIC
+>cpp_P-I
+Aib-NII-Aib-PLL-A-PIC
+>cpp_P-II
+A-NII-Aib-PLL-Aib-PIC
+>cpp_P-III
+Aib-NII-A-PLL-Aib-PIC
+>cpp_P-IV
+Aib-NII-Aib-Aib-LL-Aib-Aib-IC
+>cpp_P-V
+Aib-NII-Aib-PLL-Aib-Aib-IC
+>cpp_P-VI
+Aib-NII-Aib-Aib-LL-Aib-PIC
+>cpp_D-Penetratin
+rqikiwfqnrrmkwkk
+>cpp_B2
+rHHLrHLrrHLrHLLrHLrHHL
+>cpp_B3
+rHNHrFNFrFFFNFrFNTrTN
+>cpp_B4
+rLLrLLLrLWrrLLrLLr
+>cpp_E4
+rHrHrrHrHrrHrHr
+>cpp_E5
+rFTFHFrFEFTFHFE
+>cpp_H3
+rrrrrrrrr
+>cpp_H4
+LAELLAELLAELGGGGrrrrrrrrr
+>cpp_H5
+HHHHHHrrrrrrrrr
+>cpp_R6
+BRRRRRR
+>cpp_R7
+BRRRRRRR
+>cpp_R8
+BRRRRRRRR
+>cpp_R9
+Ahx-RRRRRRRRR
+>cpp_Cyc-R4
+B-[KRRRRE]
+>cpp_Cyc-R6
+B-[KRRRRRRE]
+>cpp_Cyc-R7
+B-[KRRRRRRRE]
+>cpp_Cyc-R8
+B-[KRRRRRRRRE]
+>cpp_Cyc-R9
+B-[KRRRRRRRRRE]
+>cpp_Cyc-r7
+B-[KrrrrrrrE]
+>cpp_Cyc-r8
+B-[KrrrrrrrrE]
+>cpp_Cyc-r9
+B-[KrrrrrrrrE]
+>cpp_Cyc-(L,D)-R6
+B-[KRrRrRrE]
+>cpp_Cyc-(L,D)-R7
+B-[KrRrRrRrE]
+>cpp_Cyc-(L,D)-R8
+B-[KRrRrRrRrE]
+>cpp_Bicyc-0-R6
+B-[ERRRK]-[KRRRE]
+>cpp_Bicyc-1-R6
+B-[ERRRK]-B-[KRRRE]
+>cpp_Bicyc-2-R6
+B-[ERRRK]-(B)2-[KRRRE]
+>cpp_Bicyc-3-R6
+B-[ERRRK]-(B)3-[KRRRE]
+>cpp_Cyc-R3-R4
+B-RRRR-[KRRRE]
+>cpp_Cyc-R4-R3
+B-RRR-[KRRRRE]
+>cpp_Cyc-R5-R2
+B-RR-[KRRRRRE]
+>cpp_Cyc-R6-R1
+B-R[KRRRRRRE]
+>cpp_NrTP2
+YKQCHKKGG-ahx-KKGSG
+>cpp_NrTP5
+ykqchkkGGkkGsG
+>cpp_NF1
+AGY(PO3)LLGKTNLKALAALAKKIL
+>cpp_NF2
+AGYLLGKT(PO3)NLKALAALAKKIL
+>cpp_NF3
+AGY(PO3)LLGKT(PO3)NLKALAALAKKIL
+>cpp_NF5
+AGY(PO3)LLGKINLKALAALAKKIL
+>cpp_NF11
+AGYLLGKTNLKALAALAKKIL
+>cpp_NF51
+δ-(Stearyl-AGYLLG)OINLKALAALAKKIL
+>cpp_NF52
+α,ε(Stearyl-AGYLLG)2KINLKALAALAKKIL
+>cpp_NF53
+ε-(Steary-AGYLLG)KINLKALAALAKKIL
+>cpp_Stearyl-TP10
+AGYLLGKINLKALAALAKKIL
+>cpp_Pepfect1
+RKKRKKKRXRHXRHXRHXR
+>cpp_Pepfect2
+MVTVLFRRLRIRRACGPPRVRV
+>cpp_Pepfect3
+AGYLLGKINLKALAALAKKIL
+>cpp_Pepfect4
+AGYLLGK(Stearyl)INLKALAALAKKIL
+>cpp_Pepfect5
+AGYLLGK[KK2sa4qn4]INLKALAALAKKIL
+>cpp_Pepfect6
+AGYLLGK[KK2sa4qn4]INLKALAALAKKIL
+>cpp_Pepfect14
+LLOOLAAAALOOLL
+>cpp_D-Tat(49-57)
+rkkrrqrrr
+>cpp_D-Tat(57-49)
+rrrqrrkkr
+>cpp_D-R5
+rrrrr
+>cpp_D-R6
+rrrrrr
+>cpp_D-R7
+rrrrrrr
+>cpp_D-R8
+rrrrrrrr
+>cpp_D-R9
+rrrrrrrrr
+>cpp_DformofKLA
+klalklalkalkaalkla
+>cpp_DformofpAntpHD(43-58)
+rqikiwfqnrrmkwkk
+>cpp_Crot(27-39)derevative
+MDCRWRWKXCKK
+>cpp_Crot(27-39)derevative
+DCRWRWKXCKK
+>cpp_Crot(27-39)derevative
+DCRWRWKCXKK
+>cpp_Crot(27-39)derevative
+CRWRWKXCKK
+>cpp_Crot(27-39)derevative
+CRWRWKCXKK
+>cpp_Crot(27-39)derevative
+RWRWKXCKK
+>cpp_Crot(27-39)derevative
+MDCRWRWKXXKK
+>cpp_Crot(27-39)derevative
+DCRWRWKXXKK
+>cpp_Crot(27-39)derevative
+CRWRWKXXKK
+>cpp_Crot(27-39)derevative
+RWRWKXXKK
+>cpp_Crot(27-39)derevative
+crwrwkcckk
+>cpp_Crot(27-39)derevative
+kcckwrwrck
+>cpp_Crot(27-39)derevative
+CrWRWKCCKK
+>cpp_Crot(27-39)derevative
+CRwRWKCCKK
+>cpp_Crot(27-39)derevative
+CRWrWKCCKK
+>cpp_Crot(27-39)derevative
+CRWRwKCCKK
+>cpp_Crot(27-39)derevative
+CrwrwKCCKK
+>cpp_Crot(27-39)derevative
+KMDXRWRWKCCKK
+>cpp_Crot(27-39)derevative
+KMDXRWRWKXCKK
+>cpp_Crot(27-39)derevative
+KMDXRWRWKXXKK
+>cpp_Crot(27-39)derevative
+KMDXRWRWKCXKK
+>cpp_Crot(27-39)derevative
+MDCRWRWKCXKK
+>cpp_Crot(27-39)derevative
+KMDXRPRPKCCKK
+>cpp_Crot(27-39)derevative
+KMDXRPRPKXCKK
+>cpp_Crot(27-39)derevative
+KMDXRPRPKCXKK
+>cpp_Crot(27-39)derevative
+KMDCRPRPKXCKK
+>cpp_Crot(27-39)derevative
+KMDCRPRPKCXKK
+>cpp_Tat(49-57)
+rkkrrqrrr
+>cpp_Tat(57-49)
+rrrqrrkkr
+>cpp_R8
+rrrrrrrr
+>cpp_Bip20
+vptlk
+>cpp_pVECmutant
+LLIILRRRIRKQaHAHSK
+>cpp_pVECmutant
+LLIILRRRIRKQAHaHSK
+>cpp_DformofpVEC
+lliilrrrirkqahahsk
+>cpp_Erns12
+rsrgrlrrgairlqrg
+>cpp_DformofF3
+akvkdepqrrsarlsakpappkpepkpkkapakk
+>cpp_DformofSweatArrowProtein(SAP)
+vrlpppvrlpppvrlppp
+>cpp_D-SynB1
+rggrlsysrrrfststgr
+>cpp_D-SynB3
+rrlsysrrrf
+>cpp_DformofC105Y
+csippevkfnpfvyli
+>cpp_PN285
+FKQqQqQqQqQq
+>cpp_Pen7-9×Arg
+kkwkmrrGaGrrrrrrrrr
+>cpp_r9
+rrrrrrrrr
+>cpp_r9
+rrrrrrrrr
+>cpp_r9
+rrrrrrrrr
+>cpp_r9k
+rrrrrrrrrk
+>cpp_Chimericr(1-9)
+rRRRRRRRr
+>cpp_Chimericr(1,3,5,7,9)
+rRrRrRrRr
+>cpp_Penetratin{pAntp-(43-58)}
+rqikiwfqnrrmkwkk
+>cpp_Penetratin{pAntp-(43-58)}
+rqikiwfqnrrmkwkk
+>cpp_hLF(38-59)peptide
+kcfqwqrnmrkvrgppvscikr
+>cpp_hLF(38-59)peptide
+kcfqwqrnmrkvrgppvscikr
+>cpp_MAP(Aib)
+KLULKLULKULKAULKLUGC
+>cpp_cTat
+crkkrrqrrr
+>cpp_cr9
+crrrrrrrrr
+>cpp_ck9
+ckkkkkkkkk
+>cpp_r8
+rrrrrrrr

Datasets/Non-Natural CPPs/CPPBase_modified_symbols.txt

@@ -0,0 +1,8 @@
+Small letters: D-isoform;
+O: Ornithine;
+Ahx: 6-aminohexanoic acid; 
+B: Beta-Alanine;
+U: α-amino isobutyric acid (Aib);
+Φ: L-2-naphthylalanine;
+J: l-2,3-diaminopropionic acid;
+X: other molecules (α-amino isobutyric acid, 1-aminocyclopentane-1-carboxylic acids (Ac5c), aeDP, aminoethylpropyl, 4-amino-butanoic acid, aeLP, aminoethylpropyl, aminohexyl residue, apDP, aminopropylpropyl, apLP, aminopropylpropyl, etc.)